Account & Business Terms

What Is PayFac vs. ISO? A Merchant's Guide

The key difference between payment facilitators (aggregated, instant setup) and ISOs (dedicated accounts, negotiated pricing, higher volume).

The Complete Definition

Understanding the difference between a payment facilitator (payfac) and an ISO (Independent Sales Organization) is essential for choosing the right payment processing structure for your business stage and volume.

**Payment Facilitator (Payfac)**: - Example companies: Square, Stripe, PayPal, Shopify Payments, Toast - Setup: Instant or same-day, minimal underwriting - Pricing: Flat rate (typically 2.6%–2.9% + per-transaction fee) - Account type: Sub-merchant account under payfac's master account - Stability: Lower — accounts can be frozen or terminated quickly - Control: Limited — payfac sets all terms and pricing - Best for: Startups, very low volume, or businesses testing card acceptance

**ISO (Independent Sales Organization)**: - Example companies: Liberty Bancard, North American Bancard, First Data agents - Setup: 1-7 business days for underwriting and approval - Pricing: Interchange plus (negotiated markup over actual interchange) - Account type: Dedicated merchant account - Stability: Higher — direct relationship with acquirer - Control: More — can negotiate rates and terms - Best for: Established businesses processing $10,000+/month

The fundamental economic difference: payfacs make money by charging a flat rate that covers their costs and profit in all scenarios. ISOs make money on a smaller markup over actual interchange, which scales with volume.

How PayFac vs. ISO Affects Your Processing Costs

Choosing between a payfac and an ISO is primarily a business stage decision: - Starting out / under $5,000/month: Payfac (easier setup, lower risk) - $5,000–$15,000/month: Either works, evaluate based on your needs - Over $15,000/month: ISO with interchange plus will typically save 0.5%–1.0% in effective rate - Over $50,000/month: ISO is almost always significantly cheaper

PayFac vs. ISO Example

Annual comparison at $300,000 in processing:
- Payfac (Square at 2.6%): $7,800/year in fees
- ISO (Interchange plus at 1.95% effective): $5,850/year in fees
- Annual savings with ISO: $1,950

Common Questions About PayFac vs. ISO

When should I switch from a payfac to an ISO?

Consider switching when you're consistently processing over $10,000-$15,000/month and the savings from lower rates justify the slightly more complex setup process. Most businesses find the crossover point between $10,000-$20,000/month.

Can I use both a payfac and an ISO?

Yes, some businesses use a payfac as a backup or for specific channels while their primary processing runs through an ISO. This can provide processing redundancy.

Related Terms

Payment FacilitatorISO/MSPFlat Rate PricingInterchange Plus PricingMerchant AccountRegistered ISO

How Liberty Bancard Handles PayFac vs. ISO

Liberty Bancard is an ISO — not a payfac. That means dedicated merchant accounts, negotiated interchange plus pricing, and personalized service. If you've outgrown Square or Stripe, we can show you exactly what you'd save by switching.

See How Liberty Bancard ComparesGet a Free Rate Comparison

Continue learning: Browse all 60 payment processing terms in our Payment Processing Glossary, or upload your statement for a free analysis of your current processing costs.